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• dc3c60f390 Update copyright master ianjauslin 2026-04-14 11:54:30 -04:00
• e60942428e Print index of lyapunov exponent ianjauslin 2026-04-14 11:49:54 -04:00
• 35352a6460 Remove init_enstrophy and init_energy from savefile ianjauslin 2025-12-14 10:29:47 -05:00
• 8fa9e7f556 Add command to print the enstrophy of the initial condition ianjauslin 2025-10-14 12:20:43 -04:00
• afe0498f21 Fix remove_entry ianjauslin 2025-06-05 14:55:34 +02:00
• 72455cbb65 Print components of u ianjauslin 2025-04-14 18:25:59 -04:00
• 7471296e59 Typo ianjauslin 2025-03-04 10:57:05 -05:00
• 08ded444b8 Use savefiles in uk ianjauslin 2025-02-10 15:34:03 -05:00
• 8a1f3987f4 when reading binary init, only read u unless using the 'resume' command. ianjauslin 2025-02-03 14:11:53 -05:00
• 89791be6d6 Print lyapunov if it is the last step ianjauslin 2025-02-03 12:27:16 -05:00
• 50c09cf164 Do not sort exponents, and fix norm of flow ianjauslin 2025-02-03 12:08:07 -05:00
• 21e8dcdb8a In RK algorithms: do not use kx,ky, use i ianjauslin 2025-02-01 14:12:54 -05:00
• e607a4abf9 Ensure that init_flow is used in conjunction with init ianjauslin 2025-02-01 12:15:56 -05:00
• 6f0f1749a4 Document flow_init in readme ianjauslin 2025-02-01 12:10:50 -05:00
• 03c2d1b02a Fix interruption of lyapunov ianjauslin 2025-02-01 11:53:19 -05:00
• d1992eca70 interrupting lyapunov mentioned in README ianjauslin 2025-01-31 21:59:41 -05:00
• 06e5b0e0da Allow the Lyapunov computation to be interrupted ianjauslin 2025-01-31 21:58:54 -05:00
• 53a0a0ae4c Remove D_epsilon ianjauslin 2025-01-31 20:50:55 -05:00
• a47ec7896b Fix bug: every column of tangent flow needs to be evolved ianjauslin 2025-01-31 17:45:25 -05:00
• 3fa3a86066 Bug fix ianjauslin 2025-01-31 15:04:41 -05:00
• 0244f03d02 Update copyright ianjauslin 2025-01-31 12:01:53 -05:00
• b0f82a2412 fix README layout ianjauslin 2025-01-31 11:09:23 -05:00
• 170aebfa0c Lyapunov in README ianjauslin 2025-01-31 11:08:20 -05:00
• 57df67cc4c Mention lyapunov algorithms in doc ianjauslin 2025-01-31 10:55:41 -05:00
• 0f07f025b5 Overhaul of lyapunov exponents ianjauslin 2025-01-31 10:52:40 -05:00
• fa52397e87 Correctly deal with complex values in lyapunov exponents documentation ianjauslin 2025-01-27 17:14:46 -05:00
• 328f3bd99c New derivation of Lyapunov exponents in doc ianjauslin 2025-01-16 11:42:15 +01:00
• acf1c27b1d Details on RK in doc ianjauslin 2024-12-16 16:57:37 -05:00
• 9d48b044ac Reorganize doc ianjauslin 2024-12-15 14:20:56 -05:00
• 9ec233fed5 Replace init_en with init_enstrophy and init_energy ianjauslin 2024-12-11 15:48:11 -05:00
• d81ad18618 Rewrite cost function for adaptive step ianjauslin 2024-11-18 17:09:17 -05:00
• 9fa10c8db4 print_alpha ianjauslin 2024-11-07 14:39:03 -05:00
• cf48b23d4d Update copyright ianjauslin 2024-10-15 11:47:13 -04:00
• c7ff1384e1 Update README ianjauslin 2024-10-15 11:45:28 -04:00
• 0404bd0cf0 Print negative values of alpha ianjauslin 2024-10-15 11:41:31 -04:00
• 7675148e7d Change order of outputs in enstrophy ianjauslin 2024-10-15 11:34:12 -04:00
• f93ada07f0 Fix order of arguments in calloc ianjauslin 2024-10-15 11:31:53 -04:00
• 41ff1919f0 Change outputs of enstrophy ianjauslin 2024-10-15 11:28:07 -04:00
• 41a5a4ba3f save_state to its own function ianjauslin 2024-03-13 11:24:47 +01:00
• 0599f69dc7 Fix lyapunov computation ianjauslin 2024-03-12 01:53:48 +01:00
• 198867751d Split real and imag part in jacobian ianjauslin 2024-03-11 23:54:11 +01:00
• 9059a24c23 Fix MATSIZE ianjauslin 2024-02-20 10:55:15 -05:00
• f9171aa355 Fix average ianjauslin 2024-02-20 10:46:53 -05:00
• c284587105 Sort Lyapunov exponents and print more ianjauslin 2024-02-20 09:32:32 -05:00
• bf8e4b728e Fix lyapunov ianjauslin 2024-02-19 22:05:30 -05:00
• ec98098709 Lyapunov parameters ianjauslin 2024-02-19 21:39:48 -05:00
• 1c3f4b9f2f Print Lyapunov exponents ianjauslin 2024-02-19 19:09:26 -05:00
• 15bcb8b467 Lyapunov command in main ianjauslin 2024-02-19 19:05:35 -05:00
• b31fab8eae Computation of Lyapunov exponents ianjauslin 2024-02-19 19:01:31 -05:00
• 89601d19d1 Jacobian of un->un+1 ianjauslin 2024-02-19 15:20:19 -05:00
• 9ecf4413a5 write ns_step routine that handles all the algorithms ianjauslin 2024-02-19 14:42:34 -05:00
• 9fe9e3d96f Jacobian of rhs ianjauslin 2024-02-19 12:20:21 -05:00
• 63e983b460 Link openblas ianjauslin 2024-02-19 11:41:47 -05:00
• 97a127a8db Document Lyapunov exponents ianjauslin 2024-02-19 11:41:35 -05:00
• 9b9734c4c2 switch point to subsubsection ianjauslin 2024-02-18 14:16:48 -05:00
• 6c12e47105 Do not override command when using 'resume' ianjauslin 2023-11-03 18:02:12 -04:00
• 209ba06cbf memory fix ianjauslin 2023-11-03 17:41:30 -04:00
• 16c80d2305 strlen in dstrings.c ianjauslin 2023-11-03 16:48:18 -04:00
• f9aac70796 dstring in read_args_from_file ianjauslin 2023-11-03 16:45:51 -04:00
• 9d232a8fca dstrings in read_params ianjauslin 2023-11-03 16:42:27 -04:00
• 04a15dd2c7 Replace argv strings with dstrings ianjauslin 2023-11-03 16:04:53 -04:00
• dd9bd74c83 dynamic strings ianjauslin 2023-11-03 12:25:02 -04:00
• 3d94694017 Resume command ianjauslin 2023-11-03 12:08:25 -04:00
• 3efdbf4451 Abort on nan ianjauslin 2023-10-10 10:43:24 -04:00
• 1ecb4bbe70 Python script to convert bin to txt and back ianjauslin 2023-09-26 13:01:00 -04:00
• f68c179038 Error in enstrophy norm for rkf45 and rkbs32 ianjauslin 2023-09-19 11:53:34 -04:00
• d986f86243 Fix: no power 1/3 in enstrophy norm ianjauslin 2023-09-19 11:51:55 -04:00
• 7a0eb20452 Typo in doc ianjauslin 2023-09-17 23:37:14 +02:00
• 60e04ac681 keep_en_cst ianjauslin 2023-06-29 16:58:33 -04:00
• 9c3ad2c400 Bug with computing averages ianjauslin 2023-06-20 11:07:35 -04:00
• 870196ec07 Save utfile and nthreads to savefile ianjauslin 2023-06-14 14:28:03 -04:00
• 6066309fa3 nthreads in README ianjauslin 2023-06-14 14:20:07 -04:00
• 7ab59aca48 utfile ianjauslin 2023-06-14 14:19:27 -04:00
• d15f58b61e Remove unnecessary includes ianjauslin 2023-06-14 12:42:02 -04:00
• aeec3ff17b max_delta and adaptive norm in rkf45 and rkbs32 ianjauslin 2023-06-14 00:14:17 -04:00
• 251426aaaa Select norm in parameter ianjauslin 2023-06-13 23:56:35 -04:00
• 3b58896e3b Proper normalization for enstrophy norm ianjauslin 2023-06-13 19:01:37 -04:00
• 34b7a0c277 delta_max and fix cabs2 ianjauslin 2023-06-13 18:45:19 -04:00
• 4ffbe1e978 Use the enstrophy-norm in rkdp54 ianjauslin 2023-06-13 17:30:51 -04:00
• 814413b6e1 1/k^3 scaling in adaptive RK ianjauslin 2023-06-07 21:02:27 -04:00
• 0fc5dce6ed SIGTERM ianjauslin 2023-05-26 17:37:51 -04:00
• 8d2af578fd Correct order of output for enstrophy ianjauslin 2023-05-17 18:01:46 -04:00
• 051cd84a29 RKDP54 ianjauslin 2023-05-17 17:41:00 -04:00
• dffa378084 Rename RKBS23 to RKBS32 ianjauslin 2023-05-17 16:59:15 -04:00
• 5224b9052f RKF45: use fourth order instead of fifth ianjauslin 2023-05-17 16:58:13 -04:00
• f57cc317ac RKF45: no not recompute k1 when decreasing step ianjauslin 2023-05-17 16:50:11 -04:00
• d069e8c94e RKBS23 ianjauslin 2023-05-17 16:47:15 -04:00
• c9312c6d16 Adaptive methods: Do not shrink delta when increasing stepsize ianjauslin 2023-05-16 18:08:48 -04:00
• dacd5c3651 Adaptive timestep: do nto change delta before all the printing ianjauslin 2023-05-16 17:03:58 -04:00
• cf8cdfe12c Use a relative tolerance for adaptive step size ianjauslin 2023-05-16 16:49:50 -04:00
• 949b3897c4 exchange en*alpha and en ianjauslin 2023-05-16 00:07:38 -04:00
• 5ede4f1084 Fix running averages for adaptive step, and base print_freq and final_time on times ianjauslin 2023-05-16 00:00:18 -04:00
• 5db3680b31 RKF45 algorithm ianjauslin 2023-05-15 20:29:06 -04:00
• 315e9a98de Fix order of output in README ianjauslin 2023-05-15 17:08:50 -04:00
• ad7410a190 Fix README ianjauslin 2023-05-10 19:37:48 -04:00
• d2c589cae4 License ianjauslin 2023-05-10 19:33:29 -04:00
• 6c10f80695 README ianjauslin 2023-05-10 19:29:49 -04:00
• 7c007e9342 Use 'enstrophy' instead of energy, and print enstrophy*alpha ianjauslin 2023-05-10 19:29:31 -04:00
• e5a126f45a Replace energy with energy*alpha ianjauslin 2023-05-08 15:04:00 -04:00
• 0b6fe9bd6b Minor bug in nsteps for resumption ianjauslin 2023-04-27 10:03:58 -04:00